Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX257580: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Solexa-143769' containing sample 'Escherichia coli HVH 27 (4-7449267)'
1 ILLUMINA (Illumina HiSeq 2000) run: 2.8M spots, 572.4M bases, 314.2Mb downloads

UUID: 25d93ed9-be99-4852-a208-1ea8a9bd1380

Design: jumping library

Submitted by: Broad Institute (BI)

Study: E coli UTI Bacteremia

PRJNA186060 • SRP019554 • All experiments • All runs

Sample: Pathogen bacterial, clinical or host-associated sample from Escherichia coli HVH 27 (4-7449267)

SAMN01885690 • SRS402167 • All experiments • All runs

Organism: Escherichia coli HVH 27 (4-7449267)

Library:

Name: Solexa-143769

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 12 attributes...) (hide...)

analysis_type: AssemblyWithReference

gssr_id: 291635.0

library_type: IlluminaStufferlessJump

lsid: broadinstitute.org:bsp.prod.sample:3VYL3

material_type: DNA:DNA Somatic

product_order: PDO-291

product_part_number: P-MCV-0001

project: G30651

research_project: RP-192

root_sample_id: SM-2TCXD

sample_id: SM-3VYL3

work_request: 35251

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-03-16 13:01:07.0	GAPipeline	RTA1.15.19.5	Sequencer Application 1.6.8.6

Runs: 1 run, 2.8M spots, 572.4M bases, 314.2Mb

Run	# of Spots	# of Bases	Size	Published
SRR800588	2,833,796	572.4M	314.2Mb	2013-04-01

ID:: 360532

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